my %bitMap = ('00' => 'T', '01' => 'C', '10' => 'A', '11' => 'G'); my @byteMap = map{ join '', map $bitMap{ $_ }, unpack '(A2)4', unpack 'B8', chr } 0 .. 255; my @wordMap = map { $byteMap[ $_ >> 8 ] . $byteMap[ $_ | 0xff ] } 0 .. 65535; ... my $DNA = join '', map{ $wordMap[ $_ ] } unpack 'n*', $raw;