$out_file="/tmp/brian_test.$datestring"; open(IN,"<$TMPCONTLIST") or die "Can't open $TMPCONTLIST!\n"; open(OUT,">$out_file") or die "Can't open $out_file!\n"; while ($line=) { @fields = split /\t/,$line; $line = join "|", @fields[1,2,3,4]; print OUT $line; print OUT "\n"; } close IN; close OUT;