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Fast Identification Of String Difference

by neversaint (Deacon)
on Jan 17, 2011 at 02:38 UTC ( #882590=perlquestion: print w/ replies, xml ) Need Help??

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  1. or download this
        my $s1 = "ACTGGA";
        my $s2 = "AGTG-A";
    
       # Note the string can be longer than this.
       # But they are always of the same length.
    
  2. or download this
    #String Position 0-based
    # First col = Base in S1
    ...
    # Third col = Position in S1 where they differ
    C G 1
    G - 4
    

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