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my $s1 = "ACTGGA";
my $s2 = "AGTG-A";
# Note the string can be longer than this.
# But they are always of the same length.
#String Position 0-based
# First col = Base in S1
# Third col = Position in S1 where they differ
C G 1
G - 4
Frying pan on the stove
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