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Re: get full hit descrption from blast output (xml)by remiah (Hermit) |
on Nov 30, 2012 at 02:20 UTC ( [id://1006384]=note: print w/replies, xml ) | Need Help?? |
Hello ejbiers. This is first time I looked into BioPerl. I have no idea for why name method stores it, just found it while looking around modules of bio perl. Your XML lacks several end tags. And real command line, I guess , perl scriptname.pl -i inputfile.xml -o goodoutputfile.txt -t test.txt -n 3 -b 1I hope you fixing them and get more proper answers from bio perl monks. regards.
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