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Re: dynamic zcat and grep

by eff_i_g (Curate)
on Mar 21, 2006 at 23:10 UTC ( #538338=note: print w/ replies, xml ) Need Help??


in reply to dynamic zcat and grep

What Unix and Perl are you running? Just curious.

I was able to get this to work in two ways:

  1. I can only use zcat on .Z files, therefore, I used gunzip -c.
  2. I created a .Z file via compress and used zcat as you have.

Does zcat -h give you any further information?


Comment on Re: dynamic zcat and grep
Re^2: dynamic zcat and grep
by clmcshque (Initiate) on Mar 21, 2006 at 23:50 UTC
    Thanks for the reply. I'm using - perl, v5.8.7 built for i686-linux Red Hat Enterprise zcat works for me when I enter it via the command line, not when it is in a perl script. gunzip -c gives the same errors. When I use single quotes:
    gunzip: compressed data not read from a terminal. Use -f to force deco +mpression. For help, type: gunzip -h
    When I use double quotes:
    ERROR - Could not open log.gz

      Since you are on a Red Hat machine anyway, you can save yourself a lot of time just by using 'zgrep'.


      We're not surrounded, we're in a target-rich environment!
        Thanks for the reply. zgrep works great on the command line, but how do I get it to work within my script? Could I do the following: (I would try it but don't have access to the system right now)
        $grep = /something/; $gzfile = file.gz; open OUTPUT "zgrep $grep $gzfile |";
      You may be able to get a better idea of what is going wrong if you include $! in your error message. This is the variable in which Perl stores the O/S error message when things like open fail, e.g.

      $fn = "non_existant_file"; open IN, "<$fn" or die "open: $fn: $!\n";

      would error with

      open: non_existant_file: no such file or directory

      Cheers,

      JohnGG

Re^2: dynamic zcat and grep
by thor (Priest) on Mar 22, 2006 at 00:33 UTC
    On some systems, gunzip -c and zcat are identical.
    thulben@alpha:~ 17 $ md5sum /bin/gzip /bin/zcat /bin/gunzip 57cd8cdf42fbda6e0a1f5e17ac986b4f /bin/gzip 57cd8cdf42fbda6e0a1f5e17ac986b4f /bin/zcat 57cd8cdf42fbda6e0a1f5e17ac986b4f /bin/gunzip
    The executable is one of those "magic" ones that recognizes how it was called and alters its behavior appropriately.

    thor

    The only easy day was yesterday

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