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Re^2: Bioperl or ncbi: parsing refseq files

by roibrodo (Sexton)
on Jun 15, 2010 at 09:30 UTC ( #844825=note: print w/ replies, xml ) Need Help??


in reply to Re: Bioperl or ncbi: parsing refseq files
in thread Bioperl or ncbi: parsing refseq files

Thanks for the reply.

I'm not sure I got it right. Even if the feature is not fully in the region of interest, but only partially in it, I want to "truncate" it and take it. I also want the sequence (that appears after all the features) to be outputted. Basically, I want to do exactly what the "change region shown" does on the online version of NCBI.

I would appreciate a more verbose example, if possible, since this are my first steps with BioPerl.

Thanks!


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