Beefy Boxes and Bandwidth Generously Provided by pair Networks
Syntactic Confectionery Delight
 
PerlMonks  

Re^4: PBS not finding file.

by onelesd (Pilgrim)
on Sep 27, 2011 at 21:16 UTC ( #928187=note: print w/replies, xml ) Need Help??


in reply to Re^3: PBS not finding file.
in thread PBS not finding file.

Let me use my crystal ball again... are you trying to run the "qsub script" from the first code sample and get it's output? If so, use backticks.

my $PBS_ARRAYID = '123' ; my @output = `/usr/bin/perl /chongle/jeri/timecheck/MUSCLEHMM.pl $PBS_ +ARRAYID > /chongle/jeri/timecheck/output.$PBS_ARRAYID.txt 2> /chongle +/jeri/timecheck/error.$PBS_ARRAYID.txt` ;

Log In?
Username:
Password:

What's my password?
Create A New User
Node Status?
node history
Node Type: note [id://928187]
help
Chatterbox?
and the web crawler heard nothing...

How do I use this? | Other CB clients
Other Users?
Others drinking their drinks and smoking their pipes about the Monastery: (3)
As of 2016-09-25 00:23 GMT
Sections?
Information?
Find Nodes?
Leftovers?
    Voting Booth?
    Extraterrestrials haven't visited the Earth yet because:







    Results (462 votes). Check out past polls.