ZWcarp has asked for the wisdom of the Perl Monks concerning the following question:
Hello Monks,
I have to complete a project involving the calculation of synonymous versus non-synonomous mutations present in a sequence dataset when compared to a particular reference sequence. The idea would be to compare a reference sequence to an alignment and get information about each mutation that arrises. Does anyone know of a good Bioperl module or some other perl based script that would be of use in calculating Non-synonomous/ synonomous for an alignment? Any help would be greatly appreciated. Thanks!
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Re: DN/DS ratio calculator
by Khen1950fx (Canon) on Oct 11, 2011 at 00:55 UTC | |
by ZWcarp (Beadle) on Oct 11, 2011 at 15:05 UTC |
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