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Re: Get random unique lines from file

by Cristoforo (Deacon)
on Aug 17, 2012 at 21:25 UTC ( #988099=note: print w/ replies, xml ) Need Help??


in reply to Get random unique lines from file

Look at the BioPerl package, (in particular Bio::SeqIO and Bio::Seq).

Bio::SeqIO provides a method for opening a FASTA file and Bio::Seq provides methods to access the particular info you're after.

Chris

Update: I just now realized that doesn't solve the problem of getting the random lines you want.  :-(


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