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Thanks for this it works great, however I need to run this on loads of files, I've had a play and can't seem to automate the command line arguments. Here's what I have but it doesn't work (probably because I'm not doing it right)
#!/usr/bin/perl -w use strict; my @files = <*.in.sep>; my %hash; for(@files) { s/[.]in[.]sep//g } for my $file (@files) { open (my $in, "<", "$file.in.sep") || die ("cannot open $file"); open (my $out,"<", "$file.out.sep") || die ("cannot open search.tx +t"); %hash = map{ s/E99/99/g; $_ => $hash{$_}++;} <$in, $out>; foreach (sort keys %hash){ print "$_ $hash{$_}\n" if !$hash{$_}; } }
Thanks Jim

In reply to Re^2: Comparing strings from different files by Jalcock501
in thread Comparing strings from different files by Jalcock501

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