The input data is like
>1elwA
AAAAAASSSSSSSSSSSSSSDDDDDDDDDDDFFFFFFFFFF
>1flwA
GGGGGGGGGGHHHHHHHHHHHHIIIIIIIIIIIIIIJJJJJJJJJJ
>1ghwA
KKKKKKKKKKLLLLLLLLLLMMMMMMMMMMNNNNNNNNNNOOOOO
Where >1elwA, >1flwA, >1ghwA should be the keys of the hashes and the respective data should be the value of the hash. The code/sub for storing in the file is
#!/usr/bin/perl
my %seqInfo = ();
open(FILE, 'test.fasta');
{
while(<FILE>)
{
my $line = $_;
if ($line =~ />.*/)
{
#print "$&\n";
}
else
{
#print "$line\n";
}
$seqInfo{$&} = $line;
print "$& => $line\n";
}
}
and the output is
=> >1elwA
=> AAAAAASSSSSSSSSSSSSSDDDDDDDDDDDFFFFFFFFFF
=> >1flwA
=> GGGGGGGGGGHHHHHHHHHHHHIIIIIIIIIIIIIIJJJJJJJJJJ
=> >1ghwA
=> KKKKKKKKKKLLLLLLLLLLMMMMMMMMMMNNNNNNNNNNOOOOO
However according to my understanding the output should be like
>1elwA => AAAAAASSSSSSSSSSSSSSDDDDDDDDDDDFFFFFFFFFF
Maybe the file is not properly stored as keys and values :( :(
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