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in reply to Re: Defining substring matches
in thread Defining substring matches

until( eof( FASTA) {

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You have two left parentheses but only one right parenthesis. 

    $seq =~ tr[\n][];

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You are replacing the newline character with a newline character?

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Re^3: Defining substring matches
by Anonymous Monk on Sep 21, 2013 at 02:19 UTC

    You are replacing the newline character with a newline character?

    Indeed, to count newline characters, but not save the count? Hmmm:)

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Re^3: Defining substring matches
by BrowserUk (Patriarch) on Sep 21, 2013 at 02:38 UTC
    See above:
    NB: The above is untested code typed directly into my browser.

    Corrected.

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