Re: Segmentation fault in DBI + XML::LibXML

[furagu]

in reply to Segmentation fault in DBI + XML::LibXML

Finally I got the solution.

Following advice from mje I ran the script in debugger and got this trace:

#0  0x000000080283d92d in pthread_mutex_destroy () from /lib/libthr.so
+.3
#1  0x0000000801a15a15 in xmlFreeMutex () from /usr/local/lib/libxml2.
+so.5
#2  0x0000000801a15455 in xmlCleanupGlobals () from /usr/local/lib/lib
+xml2.so.5
#3  0x00000008019ade8a in xmlCleanupParser () from /usr/local/lib/libx
+ml2.so.5
#4  0x000000080184edb3 in XS_XML__LibXML_END () from /usr/local/lib/pe
+rl5/site_perl/5.10.1/mach/auto/XML/LibXML/LibXML.so
#5  0x00000008006df1f4 in Perl_pp_entersub () from /usr/local/lib/perl
+5/5.10.1/mach/CORE/libperl.so
#6  0x000000080068c0b0 in Perl_call_sv () from /usr/local/lib/perl5/5.
+10.1/mach/CORE/libperl.so
#7  0x000000080068c3c3 in Perl_call_list () from /usr/local/lib/perl5/
+5.10.1/mach/CORE/libperl.so
#8  0x000000080068fe5f in perl_destruct () from /usr/local/lib/perl5/5
+.10.1/mach/CORE/libperl.so
#9  0x0000000000400bcc in main ()

Seems like the problem is related to a thread support (this is also stated in the article posted by perl514).

Postgresql-client library has a thread safety turned on by default, so it took me some time to get it built without thread safety support, and that worked.

I don't think this is a really good solution though because thread safety can be usefull, and the best way would be to fix the libxml. But my scripts do not use threads, so I'm safe :)

Here are some short instructions how to rebuild postgresql-client without thread safety for those who's having the same problem.

First, configure postgresql-client port to get config.log file created:

cd /usr/ports/databases/postgresql84-client/; make configure

Second, extract configure options set by ports system:

cd work/postgresql-8.4.10/; grep ./configure config.log

There'll be something like this:

./configure --with-libraries=/usr/local/lib --with-includes=/usr/local/include --enable-thread-safety --with-openssl --with-libxml --enable-integer-datetimes --enable-nls --without-gssapi --prefix=/usr/local --mandir=/usr/local/man --infodir=/usr/local/info/ --build=amd64-portbld-freebsd8.2

Remove '--enable-thread-safety' from configure command line and run it in the current dir.

After the library is configured, build and reinstall it the usual way:

cd ../../; make FORCE_PKG_REGISTER=1 reinstall clean

That's all, now the postgresql-client has no thread safety.

Thanks to perl514, mje and Anonymous Monk for suggestions!