Beefy Boxes and Bandwidth Generously Provided by pair Networks
No such thing as a small change
 
PerlMonks  

Re^2: Problems with ensembl perl script

by bioinfo (Initiate)
on Feb 03, 2009 at 08:53 UTC ( #740923=note: print w/ replies, xml ) Need Help??

Help for this page

Select Code to Download


  1. or download this
    -------------------- EXCEPTION --------------------
    MSG: [Bio::EnsEMBL::Compara::Member=HASH(0x9adfe40)] must be a Bio::En
    +sEMBL::Compara::MethodLinkSpeciesSet object
    
    STACK Bio::EnsEMBL::Compara::DBSQL::HomologyAdaptor::fetch_all_by_Meth
    +odLinkSpeciesSet_orthology_type_subtype /home/david/src/ensembl-compa
    +ra/modules/Bio/EnsEMBL/Compara/DBSQL/HomologyAdaptor.pm:430
    STACK toplevel ortologos.pl:35
    ---------------------------------------------------
    
  2. or download this
    use strict;
        use warnings;
        use Bio::EnsEMBL::Registry;
    ...
        }
        }
        close ("archivo");
    

Log In?
Username:
Password:

What's my password?
Create A New User
Node Status?
node history
Node Type: note [id://740923]
help
Chatterbox?
and the web crawler heard nothing...

How do I use this? | Other CB clients
Other Users?
Others lurking in the Monastery: (5)
As of 2014-11-28 01:45 GMT
Sections?
Information?
Find Nodes?
Leftovers?
    Voting Booth?

    My preferred Perl binaries come from:














    Results (191 votes), past polls