Thanks for the reply. Hopefully i have encountered a more illuminating error when I try to build the Bio-SamTools :
>Bio-SamTools-1.33 acd$ ./Build
Set up build environment without MacOSX10.5 SDK (will build i386 binar
+ies)
Set up build environment without MacOSX10.5 SDK (will build i386 binar
+ies)
Set up build environment without MacOSX10.5 SDK (will build i386 binar
+ies)
Building Bio-SamTools
gcc -I../samtools-0.1.17/ -I/usr/local/ActivePerl-5.14/lib/CORE -DXS_V
+ERSION="1.33" -DVERSION="1.33" -D_IOLIB=2 -D_FILE_OFFSET_BITS=64 -Wfo
+rmat=0 -c -fno-common -DPERL_DARWIN -arch i386 -DUSE_SITECUSTOMIZE -D
+PERL_RELOCATABLE_INCPUSH -fno-merge-constants -fno-strict-aliasing -p
+ipe -fstack-protector -O3 -o lib/Bio/DB/Sam.o lib/Bio/DB/Sam.c
ExtUtils::Mkbootstrap::Mkbootstrap('blib/arch/auto/Bio/DB/Sam/Sam.bs')
env LD_RUN_PATH=/usr/local/ActivePerl-5.14/lib/CORE cc -mmacosx-versio
+n-min=10.5 -bundle -undefined dynamic_lookup -Wl,-search_paths_first
+-arch i386 -fstack-protector -o blib/arch/auto/Bio/DB/Sam/Sam.bundle
+lib/Bio/DB/Sam.o -L../samtools-0.1.17/ -lbam -lz
ld: warning: ignoring file ../samtools-0.1.17//libbam.a, file was buil
+t for archive which is not the architecture being linked (i386)
Does this mean the libbam.a was not compiled using i386 or that it was and should not have been?
-
Are you posting in the right place? Check out Where do I post X? to know for sure.
-
Posts may use any of the Perl Monks Approved HTML tags. Currently these include the following:
<code> <a> <b> <big>
<blockquote> <br /> <dd>
<dl> <dt> <em> <font>
<h1> <h2> <h3> <h4>
<h5> <h6> <hr /> <i>
<li> <nbsp> <ol> <p>
<small> <strike> <strong>
<sub> <sup> <table>
<td> <th> <tr> <tt>
<u> <ul>
-
Snippets of code should be wrapped in
<code> tags not
<pre> tags. In fact, <pre>
tags should generally be avoided. If they must
be used, extreme care should be
taken to ensure that their contents do not
have long lines (<70 chars), in order to prevent
horizontal scrolling (and possible janitor
intervention).
-
Want more info? How to link
or How to display code and escape characters
are good places to start.
|