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Re: Running an external command

by icoder (Novice)
on Apr 26, 2012 at 08:19 UTC ( #967261=note: print w/replies, xml ) Need Help??


in reply to Running an external command

As all suggested,Read the file and put that contents into buffer
open FILE,"< generatedFile.txt" or die "cant able to read file

or

@output = `/home/.../samtools view...` @fileout = `cat file.txt 2>&1`;

This works only in unix

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