Beefy Boxes and Bandwidth Generously Provided by pair Networks
Syntactic Confectionery Delight

Re: PERL5LIB resets in a new terminal window

by derby (Abbot)
on Apr 27, 2012 at 19:57 UTC ( #967712=note: print w/replies, xml ) Need Help??

in reply to PERL5LIB resets in a new terminal window

Unless you've changed it, the default shell in Lion is bash. So to set PERL5LIB, just fireup and vi .bashrc and add this line to it

PERL5LIB=/src/ensembl/modules:/src/ensembl-compara/modules:/src/ensemb +l-variation/modules:/src/ensembl-functgenomics/modules

Now everytime you open a terminal (or tab) your environment should have PERL5LIB set.


Replies are listed 'Best First'.
Re^2: PERL5LIB resets in a new terminal window
by colicab (Initiate) on Apr 29, 2012 at 15:23 UTC
    Hi. Thanks a lot for all the feedback. I did as derby proposed is it works now. It's seems its the .profile instead of the .bashrc file I had to edit.

    Thanks Monks :-)

      Unless you've changed your shell in the preferences, either would have been fine. OS X is mostly BSD Unix underneath. Something like 90% of the tutorials and solutions online for Linux will apply and you can get that even higher by learning how to use MacPorts to install non-standard/missing tools.

      hii dear... I am facing the similar problem and getting the same error like cannot locate at @INC. Please help me.

Log In?

What's my password?
Create A New User
Node Status?
node history
Node Type: note [id://967712]
and the web crawler heard nothing...

How do I use this? | Other CB clients
Other Users?
Others chilling in the Monastery: (9)
As of 2016-10-25 21:52 GMT
Find Nodes?
    Voting Booth?
    How many different varieties (color, size, etc) of socks do you have in your sock drawer?

    Results (330 votes). Check out past polls.