Beefy Boxes and Bandwidth Generously Provided by pair Networks
The stupid question is the question not asked

Re^4: concatenating multiple lines without using . operator

by Cristoforo (Curate)
on Jun 16, 2012 at 16:08 UTC ( #976581=note: print w/replies, xml ) Need Help??

in reply to Re^3: concatenating multiple lines without using . operator
in thread concatenating multiple lines without using . operator

Hi Mike

I meant no critcism towards your post, but I'm not sure whether Bio::SeqIO can read a file where all the sequence is on 1 line rather than 60 chars to a line. Perhaps it can.    :-)

I just wanted readers to know that there is a 'write_seq()' method so they don't have to manually, (and without error), write out the 'id', 'decscription' or 'sequence'.

Again, I didn't mean to be critical of your post, but just to make readers aware of the write_seq method. (And I wasn't aware of the 'width' method and how it might be used).


  • Comment on Re^4: concatenating multiple lines without using . operator

Replies are listed 'Best First'.
Re^5: concatenating multiple lines without using . operator
by frozenwithjoy (Priest) on Jun 16, 2012 at 16:51 UTC
    Oh, no worries. I didn't feel criticized. ^__^ And ya, I had no idea about the 'width' call either, so I'm not sure if the inability for write_seq to properly use the custom width setting is a bug in the module or in the chair-keyboard interface.

Log In?

What's my password?
Create A New User
Node Status?
node history
Node Type: note [id://976581]
[ambrus]: 1nickt: the tea didn't have sugar or honey or lemon or milk. or even caffeine in a significant quantity. it's really "colored water", warm water with some fruit smell to make it more pleasant than ordinary warm water.
[ambrus]: 1nickt: in theory, it shouldn't hurt the electronics, but also could temporarily cause problems until it dries, and the inside of the keyboard doesn't dry quickly, because it's closed.
[ambrus]: 1nickt: that's the theory. the theory is also that it should have dried by Sunday morning, but it didn't. so I dunno.
[ambrus]: I'll try today evening if it works now.

How do I use this? | Other CB clients
Other Users?
Others surveying the Monastery: (9)
As of 2017-11-21 14:37 GMT
Find Nodes?
    Voting Booth?
    In order to be able to say "I know Perl", you must have:

    Results (302 votes). Check out past polls.