Thanks for your help - here is the output of the debug statement:
# rput handling /test/staging/TestMap
# rpath: /test/perf/staging/Apps/TestMap
# _set_err code: 42, str: Remote directory '/test/perf/staging/Apps/TestMap' already exists
# rput handling /test/staging/TestMap/cls
# rpath: /test/perf/staging/Apps/TestMap/cls
# _set_err code: 42, str: Remote directory '/test/perf/staging/Apps/TestMap/cls' already exists
# rput handling /test/staging/TestMap/src
# rpath: /test/perf/staging/Apps/TestMap/src
# _set_err code: 42, str: Remote directory '/test/perf/staging/Apps/TestMap/src' already exists
# rput handling /test/staging/TestMap/cls/com
# rpath: /test/perf/staging/Apps/TestMap/cls/com
# _set_err code: 42, str: Remote directory '/test/perf/staging/Apps/TestMap/cls/com' already exists
# rput handling /test/staging/TestMap/src/com
# rpath: /test/perf/staging/Apps/TestMap/src/com
# _set_err code: 42, str: Remote directory '/test/perf/staging/Apps/TestMap/src/com' already exists
# rput handling /test/staging/TestMap/cls/com/test
# rpath: /test/perf/staging/Apps/TestMap/cls/com/test
# _set_err code: 42, str: Remote directory '/test/perf/staging/Apps/TestMap/cls/com/test' already exists
# rput handling /test/staging/TestMap/src/com/test
# rpath: /test/perf/staging/Apps/TestMap/src/com/test
# _set_err code: 42, str: Remote directory '/test/perf/staging/Apps/TestMap/src/com/test' already exists
# rput handling /test/staging/TestMap/cls/com/test/trigger
# rpath: /test/perf/staging/Apps/TestMap/cls/com/test/trigger
# _set_err code: 42, str: Remote directory '/test/perf/staging/Apps/TestMap/cls/com/test/trigger' already exists
# rput handling /test/staging/TestMap/cls/com/test/trigger/TestMap.class
# rput handling /test/staging/TestMap/cls/com/test/data
# rpath: /test/perf/staging/Apps/TestMap/cls/com/test/data
# _set_err code: 42, str: Remote directory '/test/perf/staging/Apps/TestMap/cls/com/test/data' already exists
# rput handling /test/staging/TestMap/cls/com/test/data/testMembersPricingVO.class
# rput handling /test/staging/TestMap/cls/com/test/data/testPriceDetailDTO.class
# rput handling /test/staging/TestMap/cls/com/test/data/testTriggerVO.class
# rput handling /test/staging/TestMap/cls/com/test/data/testPriceHeaderDTO.class
# rput handling /test/staging/TestMap/src/com/test/trigger
# rpath: /test/perf/staging/Apps/TestMap/src/com/test/trigger
# _set_err code: 42, str: Remote directory '/test/perf/staging/Apps/TestMap/src/com/test/trigger' already exists
# rput handling /test/staging/TestMap/src/com/test/trigger/TestMap.java
# _set_status code: 3, str: Permission denied
# _set_err code: 24, str: Couldn't setstat remote file: Permission denied
Use of uninitialized value in numeric ne (!=) at /usr/lib/perl5/site_perl/5.8.8/Net/SFTP/Foreign/Common.pm line 79.
# rput handling /test/staging/TestMap/src/com/test/data
# rpath: /test/perf/staging/Apps/TestMap/src/com/test/data
# _set_err code: 42, str: Remote directory '/test/perf/staging/Apps/TestMap/src/com/test/data' already exists
# rput handling /test/staging/TestMap/src/com/test/data/testPriceHeaderDTO.java
# rput handling /test/staging/TestMap/src/com/test/data/testTriggerVO.java
# rput handling /test/staging/TestMap/src/com/test/data/testPriceDetailDTO.java
# rput handling /test/staging/TestMap/src/com/test/data/testMembersPricingVO.java
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