my $command = qq("svr_submit_RAST_job --user "$username" --passwd "$Password" --fasta "$fasta" --domain "$domain" --genetic_code "$Genetic_code") ;

print "\n\n\nGoing to run the following through system:\n $command\n";



##</code><code>##

Enter the Rast Username
username
Enter the Rast Password
password
Enter the fasta file Name
filename
Enter the Domain Name
domainname
Enter Genetic_Code
geneticcode



Going to run the following through system:
 "svr_submit_RAST_job --user "username
" --passwd "password
" --fasta "filename
" --domain "domainname
" --genetic_code "geneticcode
"