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Re^4: MCE: How to access variables globally

by biohisham (Priest)
on Dec 20, 2021 at 07:15 UTC ( [id://11139762]=note: print w/replies, xml ) Need Help??


in reply to Re^3: MCE: How to access variables globally
in thread MCE: How to access variables globally

Thanks a lot Ken for your help; your guess is on-spot. The keys reflect States that do repeat in different lines/cols and associated with them prob and errorProb values against a time stamp. So the idea is to turn the states into columns of state name\tProb[state]\t Error[state]and align them against the time. The original file is generated by a mathematical modelling (Boolean modelling of networks) software and requires changing its format to be able to do further analysis. Its a large file hence I split it and I am reading it in chunks to avoid the OOM killer.

The header looks like this 

Time    TH    ErrorTH    H    HD=0    State    Proba    ErrorProba    
+State    Proba    ErrorProba    State    State    Proba    ErrorProba

[download]

Here is how my minimum working example looks like 

use strict;
use warnings;
use Data::Dumper;
use MCE::Loop;

my $ProbTrajfile="states_example.csv";
my $ProbTrajtable_file="states_example_table.csv";

open(my $ProbTraj,"<",$ProbTrajfile) or die;
my $line=<$ProbTraj>;
my @firstlinelist=split(/\t/,$line);
my $name;
my $IndexProba=4;
my @firstline_woutH=@firstlinelist[4..$#firstlinelist];

foreach $name (@firstline_woutH)
{
    $_=$name;
    if (! m/HD=/)
    {
    last;}
    $IndexProba++;
}
our $IndexLine=0;
$line=<$ProbTraj>;
chomp($line);
my @linelist=split(/\t/,$line);
our %FullGlobal;
$FullGlobal{Time}[$IndexLine]=$linelist[0];
$FullGlobal{TH}[$IndexLine]=$linelist[1];
$FullGlobal{ErrTH}[$IndexLine]=$linelist[2];
$FullGlobal{H}[$IndexLine]=$linelist[3];
my %ProbState;
my %ErrProbState;

#create probState hash
for (my $i=$IndexProba;$i<=$#linelist;$i=$i+3)
{
    my $State="[".$linelist[$i]."]";
    $ProbState{$State}[$IndexLine]=$linelist[$i+1];
    $ErrProbState{$State}[$IndexLine]=$linelist[$i+2];

}

MCE::Loop::init {
   use_slurpio => 1, chunk_size => '20k', max_workers => 16, init_rela
+y=>0,
   #gather => MCE::Candy::out_iter_fh($ofh),
};

%FullGlobal=mce_loop_f{
    my ( $output, $mce, $chunk_ref, $chunk_id ) = ( '', @_ );
    open my $ifh, "<", $chunk_ref;
    
    while(<$ifh>)
        {   
            $IndexLine++;
            print $IndexLine, $/;
            foreach my $State (keys(%ProbState))
            {
            $ProbState{$State}[$IndexLine]=0;
            $ErrProbState{$State}[$IndexLine]=0;
            }
            chomp($_);
            @linelist=split(/\t/,$_);
            $FullGlobal{Time}[$IndexLine]=$linelist[0];
            $FullGlobal{TH}[$IndexLine]=$linelist[1];
            $FullGlobal{ErrTH}[$IndexLine]=$linelist[2];
            $FullGlobal{H}[$IndexLine]=$linelist[3];   
            for (my $i=$IndexProba;$i<=$#linelist;$i=$i+3)
            {
            my $State="[".$linelist[$i]."]";
            if (defined $ProbState{$State}[$IndexLine-1])
            {
                $ProbState{$State}[$IndexLine]=$linelist[$i+1];
                 $ErrProbState{$State}[$IndexLine]=$linelist[$i+2];
            }
            else
            {
                for(my $PastIndexLine=0;$PastIndexLine<$IndexLine;$Pas
+tIndexLine++)
                {
                $ProbState{$State}[$PastIndexLine]=0;    
                $ErrProbState{$State}[$PastIndexLine]=0;
                }
                $ProbState{$State}[$IndexLine]=$linelist[$i+1];
                $ErrProbState{$State}[$IndexLine]=$linelist[$i+2];
                #print "$IndexLine\t",$ProbState{$State}[$IndexLine]=$
+linelist[$i+1],"\n";
            }
            }
            
        }
        close $ifh;

    MCE->gather(%FullGlobal);
#   MCE->gather( $chunk_id, $output, \$IndexLine );
   #gather => MCE::Candy::out_iter_array(\$IndexLine),
#   return $IndexLine;
#    MCE::relay {
#        MCE->gather(\$IndexLine) 
#    };
#    MCE->relay_unlock(
#    sub {
#         $_=$IndexLine;
#      });
#print Dumper(\%FullGlobal);

} $ProbTrajfile;

#write the trajectory table in file (the hashes ain't accessible outsi
+de mce_loop_f
my @StateList=keys(%ProbState);
open (my $ProbTrajTable,">", $ProbTrajtable_file) or die ($!);
print $ProbTrajTable "Time\t";
print $ProbTrajTable "TH\t";
print $ProbTrajTable "ErrTH\t";
print $ProbTrajTable "H\t" ;
foreach my $State (@StateList)
{
    $_=$State;
    s/ //g;
    print $ProbTrajTable "Prob".$_."\t"."ErrProb".$_."\t";
}
print $ProbTrajTable "\n";
for (my $i=0;$i<=38;$i++)
{
    print $ProbTrajTable $FullGlobal{Time}[$i]."\t";
    print $ProbTrajTable $FullGlobal{TH}[$i]."\t";
    print $ProbTrajTable $FullGlobal{ErrTH}[$i]."\t";
    print $ProbTrajTable $FullGlobal{H}[$i]."\t";
    foreach my $State (@StateList)
    {
    print $ProbTrajTable $ProbState{$State}[$i]."\t".$ErrProbState{$St
+ate}[$i]."\t";
    }
    print $ProbTrajTable "\n";
}
close($ProbTrajTable);

[download]

And here is an excerpt from the 15million tab separated records 

Time    TH    ErrorTH    H    HD=0    State    Proba    ErrorProba    
+State    Proba    ErrorProba    State    State    Proba    ErrorProba
0    2.8858    0.0006    13.7791    1    TSP1_2 -- Invasiveness_migrat
+ion -- Senescence -- Glut1_4 -- BCL_XL -- Permeability_leakiness -- E
+nolase_1 -- Ang_1 -- Erythropoietin    1E-06    1E-06    TSP1_2 -- In
+vasiveness_migration -- Senescence -- P21 -- BCL_XL -- Permeability_l
+eakiness -- Enolase_1 -- S6k1 -- Hmox -- TWIST1    1E-06    0    TSP1
+_2 -- Invasiveness_migration -- Senescence -- BCL_XL -- LDHA -- Ang_1
+ -- S6k1 -- Erythropoietin    TSP1_2 -- Invasiveness_migration -- Sen
+escence -- BCL_XL -- LDHA -- Permeability_leakiness -- Enolase_1 -- A
+ng_1    3E-06    1E-06
0.5    2.3538    0.0008    15.1476    1    TSP1_2 -- Senescence -- Glu
+t1_4 -- BCL_XL -- Enolase_1 -- Ang_1 -- TWIST1 -- Erythropoietin    0
+    0    TSP1_2 -- Senescence -- Glut1_4 -- BCL_XL -- Permeability_le
+akiness -- Ang_1 -- Hmox -- Erythropoietin    1E-06    1E-06    TSP1_
+2 -- Senescence -- BCL_XL -- LDHA -- Enolase_1 -- Ang_1 -- S6k1    TS
+P1_2 -- Senescence -- LDHA -- Ang_1 -- S6k1 -- Hmox -- Erythropoietin
+    1E-06    1E-06
1    1.8685    0.001    14.027    1    VEGF -- Ang_2 -- TSP1_2 -- Sene
+scence -- Glut1_4 -- LDHA -- Enolase_1 -- Ang_1 -- S6k1 -- Hmox    1E
+-06    1E-06    VEGF -- Ang_2 -- TSP1_2 -- Senescence -- P21 -- BCL_X
+L -- Enolase_1 -- Ang_1 -- S6k1 -- Hmox -- TWIST1 -- Erythropoietin  
+  1E-06    1E-06    VEGF -- Ang_2 -- TSP1_2 -- Senescence -- Enolase_
+1 -- S6k1 -- TWIST1 -- Erythropoietin    VEGF -- Ang_2 -- TSP1_2 -- S
+enescence -- P21 -- Permeability_leakiness -- Enolase_1 -- Ang_1 -- T
+WIST1    0    0
1.5    1.4099    0.0011    12.1829    1    VEGF -- Ang_2 -- Invasivene
+ss_migration -- Senescence -- Glut1_4 -- Enolase_1 -- Hmox -- Erythro
+poietin    0    0    VEGF -- Ang_2 -- Invasiveness_migration -- Senes
+cence -- LDHA -- Permeability_leakiness -- Enolase_1 -- Erythropoieti
+n    0    0    VEGF -- Ang_2 -- Invasiveness_migration -- Senescence 
+-- Glut1_4 -- P21 -- BCL_XL -- LDHA -- Permeability_leakiness -- Ang_
+1 -- TWIST1    VEGF -- Ang_2 -- Invasiveness_migration -- Senescence 
+-- P21 -- LDHA -- Permeability_leakiness -- Enolase_1 -- Ang_1 -- S6k
+1 -- Hmox -- TWIST1 -- Erythropoietin    1E-06    1E-06
2    1.0082    0.0011    10.2065    1    IL_8 -- Maspin -- Glut1_4 -- 
+P21 -- LDHA -- S6k1 -- Hmox -- TWIST1 -- Erythropoietin    1E-06    1
+E-06    IL_8 -- Maspin -- Glut1_4 -- P21 -- LDHA -- Enolase_1 -- Hmox
+ -- TWIST1 -- Erythropoietin    1E-06    1E-06    IL_8 -- Maspin -- G
+lut1_4 -- P21 -- BCL_XL -- Enolase_1 -- S6k1 -- Hmox -- TWIST1 -- Ery
+thropoietin    VEGF -- P21 -- LDHA -- S6k1 -- Hmox -- TWIST1 -- Eryth
+ropoietin    0    0
2.5    0.6879    0.001    8.365    1    VEGF -- Maspin -- Glut1_4 -- P
+21 -- BCL_XL -- LDHA -- Enolase_1 -- S6k1 -- Hmox -- TWIST1 -- Erythr
+opoietin    1E-06    1E-06    Glut1_4 -- P21 -- BCL_XL -- LDHA    0  
+  0    Ang_2 -- TSP1_2 -- Glut1_4 -- P21 -- LDHA -- Enolase_1 -- Ang_
+1 -- TWIST1    VEGF -- Ang_2 -- Senescence -- Glut1_4 -- P21 -- BCL_X
+L -- LDHA -- Enolase_1 -- S6k1 -- Hmox -- Erythropoietin    6E-06    
+3E-06
3    0.4512    0.0009    6.7607    1    IL_8 -- Ang_2 -- TSP1_2 -- Glu
+t1_4 -- LDHA -- Permeability_leakiness -- S6k1    0    0    Invasiven
+ess_migration -- Glut1_4 -- P21 -- BCL_XL -- LDHA -- Ang_1    0    0 
+   Maspin -- Invasiveness_migration -- Glut1_4 -- P21 -- BCL_XL -- LD
+HA -- Ang_1    VEGF -- TSP1_2 -- Invasiveness_migration -- Senescence
+ -- Glut1_4 -- P21 -- BCL_XL -- Permeability_leakiness -- Enolase_1 -
+- Ang_1 -- S6k1 -- TWIST1    2E-06    2E-06
3.5    0.2865    0.0007    5.4133    1    VEGF -- Ang_2 -- Maspin -- G
+lut1_4 -- P21 -- BCL_XL -- LDHA -- Enolase_1 -- S6k1 -- Hmox -- TWIST
+1 -- Erythropoietin    0    0    VEGF -- TSP1_2 -- Maspin -- Glut1_4 
+-- P21 -- BCL_XL -- LDHA -- Permeability_leakiness -- Enolase_1 -- S6
+k1 -- Hmox -- TWIST1 -- Erythropoietin    1E-06    1E-06    Maspin --
+ Senescence -- Glut1_4 -- P21 -- BCL_XL -- Permeability_leakiness -- 
+Enolase_1 -- Ang_1 -- S6k1 -- Hmox -- TWIST1    VEGF -- IL_8 -- Ang_2
+ -- TSP1_2 -- Maspin -- Invasiveness_migration -- Senescence -- Glut1
+_4 -- BCL_XL -- LDHA -- Permeability_leakiness -- Ang_1 -- S6k1 -- TW
+IST1 -- Erythropoietin    3E-06    2E-06
4    0.1783    0.0006    4.3068    1    VEGF -- Maspin -- Invasiveness
+_migration -- Glut1_4 -- P21 -- BCL_XL -- LDHA -- Ang_1 -- S6k1 -- Hm
+ox -- TWIST1 -- Erythropoietin    0    0    VEGF -- Maspin -- Invasiv
+eness_migration -- Glut1_4 -- P21 -- BCL_XL -- LDHA -- S6k1 -- Hmox -
+- TWIST1 -- Erythropoietin    1E-06    1E-06    VEGF -- Ang_2 -- TSP1
+_2 -- Invasiveness_migration -- Glut1_4 -- P21 -- BCL_XL -- LDHA -- P
+ermeability_leakiness -- Enolase_1 -- S6k1 -- Hmox -- TWIST1 -- Eryth
+ropoietin    VEGF -- TSP1_2 -- Invasiveness_migration -- Senescence -
+- Glut1_4 -- P21 -- BCL_XL -- Permeability_leakiness -- Enolase_1 -- 
+Ang_1 -- S6k1 -- Hmox -- TWIST1    0    0
4.5    0.1101    0.0005    3.4108    1    Invasiveness_migration -- Se
+nescence -- Glut1_4 -- P21 -- BCL_XL -- Ang_1    2E-06    2E-06    An
+g_2 -- Invasiveness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_
+XL -- LDHA -- Enolase_1 -- S6k1 -- Hmox -- TWIST1    1E-06    1E-06  
+  Ang_2 -- Invasiveness_migration -- Senescence -- Glut1_4 -- P21 -- 
+BCL_XL -- LDHA -- Enolase_1 -- S6k1 -- Hmox -- TWIST1 -- Erythropoiet
+in    IL_8 -- Ang_2 -- TSP1_2 -- Invasiveness_migration -- Senescence
+ -- Glut1_4 -- P21 -- BCL_XL -- LDHA -- Enolase_1 -- S6k1 -- Hmox -- 
+TWIST1    5E-06    2E-06
5    0.0687    0.0004    2.6963    1    VEGF -- IL_8 -- Ang_2 -- TSP1_
+2 -- Maspin -- Glut1_4 -- P21 -- BCL_XL -- LDHA -- Permeability_leaki
+ness -- Enolase_1 -- S6k1 -- Hmox -- TWIST1 -- Erythropoietin    2E-0
+6    2E-06    VEGF -- IL_8 -- Ang_2 -- TSP1_2 -- Maspin -- Glut1_4 --
+ P21 -- BCL_XL -- LDHA -- Permeability_leakiness -- Enolase_1 -- S6k1
+ -- Hmox -- Erythropoietin    1E-06    1E-06    VEGF -- IL_8 -- Ang_2
+ -- TSP1_2 -- Maspin -- Glut1_4 -- P21 -- BCL_XL -- Enolase_1 -- S6k1
+ -- Hmox -- TWIST1 -- Erythropoietin    VEGF -- IL_8 -- Ang_2 -- TSP1
+_2 -- Maspin -- Invasiveness_migration -- Senescence -- P21 -- LDHA -
+- Permeability_leakiness -- Enolase_1 -- S6k1 -- TWIST1    1E-06    1
+E-06
5.5    0.0434    0.0003    2.1258    1    VEGF -- Ang_2 -- TSP1_2 -- S
+enescence -- Glut1_4 -- P21 -- BCL_XL -- LDHA -- Permeability_leakine
+ss -- Enolase_1 -- S6k1 -- Hmox -- TWIST1 -- Erythropoietin    0    0
+    VEGF -- TSP1_2 -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- Perme
+ability_leakiness -- Ang_1    0    0    TSP1_2 -- Maspin -- Invasiven
+ess_migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- Permeabili
+ty_leakiness -- Ang_1    VEGF -- IL_8 -- Ang_2 -- TSP1_2 -- Maspin --
+ Senescence -- Glut1_4 -- P21 -- BCL_XL -- LDHA -- Enolase_1 -- S6k1 
+-- Hmox -- Erythropoietin    1E-06    1E-06
6    0.0278    0.0002    1.6687    1    IL_8 -- Ang_2 -- Invasiveness_
+migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- LDHA -- Enolas
+e_1 -- TWIST1 -- Erythropoietin    1E-06    1E-06    IL_8 -- Ang_2 --
+ Invasiveness_migration -- Senescence -- Glut1_4 -- BCL_XL -- LDHA --
+ Enolase_1 -- TWIST1 -- Erythropoietin    1E-06    1E-06    TSP1_2 --
+ Invasiveness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- 
+LDHA -- Permeability_leakiness -- Enolase_1 -- Hmox -- TWIST1 -- Eryt
+hropoietin    VEGF -- IL_8 -- Ang_2 -- TSP1_2 -- Maspin -- Invasivene
+ss_migration -- Glut1_4 -- P21 -- BCL_XL -- LDHA -- Enolase_1 -- Hmox
+ -- TWIST1 -- Erythropoietin    9E-06    4E-06
6.5    0.0185    0.0002    1.307    1    Ang_2 -- Maspin -- Invasivene
+ss_migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- LDHA -- TWI
+ST1 -- Erythropoietin    0    0    Maspin -- Invasiveness_migration -
+- Senescence -- Glut1_4 -- P21 -- BCL_XL -- LDHA -- TWIST1 -- Erythro
+poietin    0    0    Maspin -- Invasiveness_migration -- Senescence -
+- Glut1_4 -- P21 -- BCL_XL -- LDHA -- Permeability_leakiness -- TWIST
+1 -- Erythropoietin    VEGF -- IL_8 -- Ang_2 -- TSP1_2 -- Invasivenes
+s_migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- LDHA -- Perm
+eability_leakiness -- S6k1 -- Hmox -- TWIST1    3E-06    2E-06
7    0.0127    0.0002    1.0198    1    VEGF -- TSP1_2 -- Invasiveness
+_migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- LDHA -- Perme
+ability_leakiness -- Ang_1    1E-06    1E-06    VEGF -- TSP1_2 -- Inv
+asiveness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- Ang_
+1    0    0    VEGF -- TSP1_2 -- Invasiveness_migration -- Senescence
+ -- Glut1_4 -- P21 -- Ang_1    VEGF -- IL_8 -- Invasiveness_migration
+ -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- LDHA -- Enolase_1 -- Hm
+ox -- TWIST1 -- Erythropoietin    2E-06    2E-06
7.5    0.0087    0.0001    0.7924    1    VEGF -- TSP1_2 -- Maspin -- 
+Invasiveness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- P
+ermeability_leakiness -- Ang_1    2E-06    2E-06    VEGF -- Ang_2 -- 
+Invasiveness_migration -- Senescence -- Glut1_4 -- P21 -- LDHA -- Eno
+lase_1 -- S6k1 -- Hmox -- TWIST1 -- Erythropoietin    1E-06    1E-06 
+   VEGF -- Ang_2 -- Invasiveness_migration -- Senescence -- Glut1_4 -
+- P21 -- LDHA -- Enolase_1 -- Ang_1 -- S6k1 -- Hmox -- TWIST1 -- Eryt
+hropoietin    VEGF -- IL_8 -- Ang_2 -- Maspin -- Invasiveness_migrati
+on -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- LDHA -- Permeability_
+leakiness -- Enolase_1 -- Hmox -- TWIST1 -- Erythropoietin    0.00010
+1    1.3E-05
8    0.0061    0.0001    0.6144    1    VEGF -- IL_8 -- Ang_2 -- TSP1_
+2 -- Invasiveness_migration -- Glut1_4 -- P21 -- BCL_XL -- LDHA -- Pe
+rmeability_leakiness -- Enolase_1 -- S6k1 -- Hmox -- TWIST1 -- Erythr
+opoietin    1E-06    1E-06    VEGF -- TSP1_2 -- Maspin -- Invasivenes
+s_migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- Permeability
+_leakiness -- Ang_1    0    0    VEGF -- TSP1_2 -- Maspin -- Invasive
+ness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- Permeabil
+ity_leakiness            
8.5    0.0043    0.0001    0.4727    1    VEGF -- IL_8 -- Ang_2 -- Mas
+pin -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- LDHA -- Enolase_1 --
+ S6k1 -- Hmox -- TWIST1 -- Erythropoietin    0    0    VEGF -- Ang_2 
+-- Maspin -- Invasiveness_migration -- Senescence -- Glut1_4 -- P21 -
+- BCL_XL -- LDHA -- Permeability_leakiness -- Enolase_1 -- S6k1 -- Hm
+ox -- TWIST1 -- Erythropoietin    0    0    VEGF -- Maspin -- Invasiv
+eness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- LDHA -- 
+Permeability_leakiness -- Enolase_1 -- S6k1 -- Hmox -- TWIST1 -- Eryt
+hropoietin            
9    0.0031    0.0001    0.363    1    VEGF -- Ang_2 -- TSP1_2 -- Masp
+in -- Invasiveness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_X
+L -- LDHA -- Permeability_leakiness -- Enolase_1 -- S6k1 -- Hmox -- T
+WIST1 -- Erythropoietin    7.7E-05    1.2E-05    VEGF -- IL_8 -- Ang_
+2 -- TSP1_2 -- Maspin -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- LD
+HA -- Permeability_leakiness -- Enolase_1 -- S6k1 -- Hmox -- TWIST1 -
+- Erythropoietin    5.3E-05    1E-05    IL_8 -- Ang_2 -- TSP1_2 -- In
+vasiveness_migration -- Senescence -- Glut1_4 -- P21 -- LDHA -- Perme
+ability_leakiness -- Enolase_1 -- Ang_1 -- S6k1 -- Hmox -- TWIST1 -- 
+Erythropoietin            
9.5    0.0022    0.0001    0.2772    1    VEGF -- Ang_2 -- TSP1_2 -- I
+nvasiveness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- LD
+HA -- Permeability_leakiness -- Enolase_1 -- S6k1 -- Hmox -- TWIST1 -
+- Erythropoietin    0    0    VEGF -- IL_8 -- Invasiveness_migration 
+-- Senescence -- Glut1_4 -- P21 -- BCL_XL -- LDHA -- Permeability_lea
+kiness -- Enolase_1 -- Ang_1 -- TWIST1 -- Erythropoietin    1E-06    
+1E-06    VEGF -- IL_8 -- Invasiveness_migration -- Senescence -- Glut
+1_4 -- P21 -- BCL_XL -- LDHA -- Enolase_1 -- Ang_1 -- TWIST1 -- Eryth
+ropoietin            
10    0.0015    0.0001    0.2105    1    VEGF -- IL_8 -- Maspin -- Inv
+asiveness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- LDHA
+ -- Permeability_leakiness -- Enolase_1 -- Hmox -- TWIST1 -- Erythrop
+oietin    2E-06    2E-06    VEGF -- IL_8 -- Maspin -- Invasiveness_mi
+gration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- LDHA -- Enolase_
+1 -- S6k1 -- Hmox -- TWIST1 -- Erythropoietin    6E-06    3E-06    VE
+GF -- IL_8 -- Maspin -- Invasiveness_migration -- Senescence -- Glut1
+_4 -- P21 -- BCL_XL -- LDHA -- Enolase_1 -- Hmox -- TWIST1 -- Erythro
+poietin            
10.5    0.0011    0    0.1595    1    VEGF -- IL_8 -- Ang_2 -- Invasiv
+eness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- LDHA -- 
+Permeability_leakiness -- Enolase_1 -- S6k1 -- Hmox -- TWIST1 -- Eryt
+hropoietin    0    0    IL_8 -- Ang_2 -- TSP1_2 -- Invasiveness_migra
+tion -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- LDHA -- Permeabilit
+y_leakiness -- Enolase_1 -- Ang_1 -- S6k1 -- Hmox -- TWIST1 -- Erythr
+opoietin    2E-06    2E-06    VEGF -- IL_8 -- Invasiveness_migration 
+-- Senescence -- Glut1_4 -- P21 -- BCL_XL -- LDHA -- Enolase_1 -- Ang
+_1 -- Hmox -- TWIST1 -- Erythropoietin            
11    0.0007    0    0.1199    1    VEGF -- IL_8 -- TSP1_2 -- Maspin -
+- Invasiveness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL --
+ LDHA -- Permeability_leakiness -- Enolase_1 -- S6k1 -- Hmox -- TWIST
+1 -- Erythropoietin    8E-06    4E-06    VEGF -- IL_8 -- Ang_2 -- TSP
+1_2 -- Maspin -- Invasiveness_migration -- Senescence -- Glut1_4 -- P
+21 -- BCL_XL -- LDHA -- Permeability_leakiness -- Enolase_1 -- S6k1 -
+- TWIST1    6E-06    3E-06    VEGF -- IL_8 -- Ang_2 -- TSP1_2 -- Masp
+in -- Invasiveness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_X
+L -- LDHA -- Permeability_leakiness -- Enolase_1 -- Hmox -- Erythropo
+ietin            
11.5    0.0006    0    0.0896    1    VEGF -- IL_8 -- Ang_2 -- TSP1_2 
+-- Maspin -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- LDHA -- Permea
+bility_leakiness -- Enolase_1 -- S6k1 -- Hmox -- TWIST1 -- Erythropoi
+etin    2E-06    2E-06    VEGF -- IL_8 -- Invasiveness_migration -- S
+enescence -- Glut1_4 -- P21 -- BCL_XL -- LDHA -- Enolase_1 -- S6k1 --
+ Hmox -- TWIST1 -- Erythropoietin    2E-06    2E-06    VEGF -- IL_8 -
+- Ang_2 -- TSP1_2 -- Invasiveness_migration -- Senescence -- Glut1_4 
+-- P21 -- BCL_XL -- LDHA -- Permeability_leakiness -- Enolase_1 -- An
+g_1 -- S6k1 -- Hmox -- TWIST1 -- Erythropoietin            
12    0.0004    0    0.0664    1    VEGF -- IL_8 -- Ang_2 -- TSP1_2 --
+ Maspin -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- LDHA -- Permeabi
+lity_leakiness -- Enolase_1 -- S6k1 -- Hmox -- TWIST1 -- Erythropoiet
+in    0    0    VEGF -- Ang_2 -- TSP1_2 -- Maspin -- Invasiveness_mig
+ration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- LDHA -- Permeabil
+ity_leakiness -- Enolase_1 -- S6k1 -- Hmox -- TWIST1 -- Erythropoieti
+n    4E-06    2E-06    VEGF -- IL_8 -- Ang_2 -- TSP1_2 -- Maspin -- I
+nvasiveness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- Pe
+rmeability_leakiness -- Enolase_1 -- S6k1 -- Hmox -- TWIST1 -- Erythr
+opoietin            
12.5    0.0002    0    0.0486    1    VEGF -- IL_8 -- Maspin -- Invasi
+veness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- LDHA --
+ Enolase_1 -- Hmox -- TWIST1 -- Erythropoietin    4E-06    3E-06    V
+EGF -- Ang_2 -- TSP1_2 -- Maspin -- Invasiveness_migration -- Senesce
+nce -- Glut1_4 -- P21 -- BCL_XL -- LDHA -- Permeability_leakiness -- 
+Enolase_1 -- S6k1 -- Hmox -- TWIST1 -- Erythropoietin    2E-06    2E-
+06    IL_8 -- Ang_2 -- TSP1_2 -- Maspin -- Invasiveness_migration -- 
+Senescence -- Glut1_4 -- P21 -- BCL_XL -- LDHA -- Permeability_leakin
+ess -- Enolase_1 -- S6k1 -- Hmox -- TWIST1 -- Erythropoietin         
+   
13    0.0002    0    0.0353    1    VEGF -- IL_8 -- Maspin -- Invasive
+ness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- LDHA -- E
+nolase_1 -- Hmox -- TWIST1 -- Erythropoietin    2E-06    2E-06    VEG
+F -- Ang_2 -- TSP1_2 -- Maspin -- Invasiveness_migration -- Senescenc
+e -- Glut1_4 -- P21 -- BCL_XL -- LDHA -- Permeability_leakiness -- En
+olase_1 -- S6k1 -- Hmox -- TWIST1 -- Erythropoietin    2E-06    2E-06
+    IL_8 -- Ang_2 -- TSP1_2 -- Maspin -- Invasiveness_migration -- Se
+nescence -- Glut1_4 -- P21 -- BCL_XL -- LDHA -- Permeability_leakines
+s -- Enolase_1 -- S6k1 -- Hmox -- TWIST1 -- Erythropoietin           
+ 
13.5    0.0001    0    0.0261    1    VEGF -- IL_8 -- Maspin -- Invasi
+veness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- LDHA --
+ Enolase_1 -- Hmox -- TWIST1 -- Erythropoietin    1E-06    1E-06    V
+EGF -- Ang_2 -- TSP1_2 -- Maspin -- Invasiveness_migration -- Senesce
+nce -- Glut1_4 -- P21 -- BCL_XL -- LDHA -- Permeability_leakiness -- 
+Enolase_1 -- S6k1 -- Hmox -- TWIST1 -- Erythropoietin    2E-06    2E-
+06    VEGF -- IL_8 -- Ang_2 -- TSP1_2 -- Invasiveness_migration -- Se
+nescence -- Glut1_4 -- P21 -- BCL_XL -- LDHA -- Permeability_leakines
+s -- Enolase_1 -- Ang_1 -- S6k1 -- Hmox -- TWIST1 -- Erythropoietin  
+          
14    0.0001    0    0.019    1    VEGF -- Ang_2 -- TSP1_2 -- Maspin -
+- Invasiveness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL --
+ LDHA -- Permeability_leakiness -- Enolase_1 -- S6k1 -- Hmox -- TWIST
+1 -- Erythropoietin    2E-06    2E-06    VEGF -- IL_8 -- Ang_2 -- TSP
+1_2 -- Invasiveness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_
+XL -- LDHA -- Permeability_leakiness -- Enolase_1 -- S6k1 -- Hmox -- 
+TWIST1 -- Erythropoietin    4.9E-05    9E-06    VEGF -- IL_8 -- Ang_2
+ -- Maspin -- Invasiveness_migration -- Senescence -- Glut1_4 -- P21 
+-- BCL_XL -- LDHA -- Enolase_1 -- Hmox -- TWIST1 -- Erythropoietin   
+         
14.5    0.0001    0    0.0138    1    VEGF -- IL_8 -- Ang_2 -- Maspin 
+-- Invasiveness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -
+- LDHA -- Enolase_1 -- Hmox -- TWIST1 -- Erythropoietin    6.9E-05   
+ 1.1E-05    VEGF -- IL_8 -- Ang_2 -- Maspin -- Invasiveness_migration
+ -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- LDHA -- Enolase_1 -- S6
+k1 -- Hmox -- TWIST1 -- Erythropoietin    7.7E-05    1.2E-05    VEGF 
+-- IL_8 -- Ang_2 -- TSP1_2 -- Maspin -- Invasiveness_migration -- Sen
+escence -- Glut1_4 -- P21 -- BCL_XL -- LDHA -- Permeability_leakiness
+ -- Enolase_1 -- S6k1 -- TWIST1 -- Erythropoietin            
15    0    0    0.01    1    VEGF -- IL_8 -- Ang_2 -- TSP1_2 -- Invasi
+veness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- LDHA --
+ Permeability_leakiness -- Enolase_1 -- S6k1 -- Hmox -- TWIST1 -- Ery
+thropoietin    1.1E-05    5E-06    VEGF -- IL_8 -- Ang_2 -- TSP1_2 --
+ Maspin -- Invasiveness_migration -- Senescence -- Glut1_4 -- P21 -- 
+BCL_XL -- LDHA -- Permeability_leakiness -- Enolase_1 -- S6k1 -- TWIS
+T1 -- Erythropoietin    4E-06    3E-06    VEGF -- IL_8 -- Ang_2 -- TS
+P1_2 -- Maspin -- Invasiveness_migration -- Senescence -- Glut1_4 -- 
+P21 -- BCL_XL -- LDHA -- Permeability_leakiness -- S6k1            
15.5    0    0    0.0073    1    VEGF -- IL_8 -- Ang_2 -- TSP1_2 -- In
+vasiveness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- LDH
+A -- Permeability_leakiness -- Enolase_1 -- S6k1 -- Hmox -- TWIST1 --
+ Erythropoietin    9E-06    4E-06    VEGF -- IL_8 -- Ang_2 -- TSP1_2 
+-- Maspin -- Invasiveness_migration -- Senescence -- Glut1_4 -- P21 -
+- BCL_XL -- LDHA -- Permeability_leakiness -- Enolase_1 -- S6k1 -- TW
+IST1 -- Erythropoietin    2E-06    2E-06    VEGF -- IL_8 -- Ang_2 -- 
+TSP1_2 -- Maspin -- Invasiveness_migration -- Senescence -- Glut1_4 -
+- P21 -- BCL_XL -- LDHA -- Permeability_leakiness -- S6k1            
16    0    0    0.0051    1    VEGF -- IL_8 -- Ang_2 -- TSP1_2 -- Inva
+siveness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- LDHA 
+-- Permeability_leakiness -- Enolase_1 -- S6k1 -- Hmox -- TWIST1 -- E
+rythropoietin    2E-06    2E-06    VEGF -- IL_8 -- Ang_2 -- TSP1_2 --
+ Maspin -- Invasiveness_migration -- Senescence -- Glut1_4 -- P21 -- 
+BCL_XL -- LDHA -- Permeability_leakiness -- Enolase_1 -- S6k1 -- TWIS
+T1 -- Erythropoietin    2E-06    2E-06    VEGF -- IL_8 -- Ang_2 -- TS
+P1_2 -- Maspin -- Invasiveness_migration -- Senescence -- Glut1_4 -- 
+P21 -- BCL_XL -- LDHA -- Permeability_leakiness -- S6k1 -- Hmox -- TW
+IST1            
16.5    0    0    0.0037    1    VEGF -- IL_8 -- Ang_2 -- TSP1_2 -- In
+vasiveness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- LDH
+A -- Permeability_leakiness -- Enolase_1 -- S6k1 -- Hmox -- TWIST1 --
+ Erythropoietin    2E-06    2E-06    VEGF -- IL_8 -- Ang_2 -- TSP1_2 
+-- Maspin -- Invasiveness_migration -- Senescence -- Glut1_4 -- P21 -
+- BCL_XL -- LDHA -- Permeability_leakiness -- Enolase_1 -- S6k1 -- TW
+IST1 -- Erythropoietin    1E-06    1E-06    VEGF -- IL_8 -- Ang_2 -- 
+TSP1_2 -- Maspin -- Invasiveness_migration -- Senescence -- Glut1_4 -
+- P21 -- BCL_XL -- LDHA -- Permeability_leakiness -- Enolase_1 -- S6k
+1 -- Hmox -- TWIST1            
17    0    0    0.0027    1    VEGF -- IL_8 -- Ang_2 -- TSP1_2 -- Inva
+siveness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- LDHA 
+-- Permeability_leakiness -- Enolase_1 -- S6k1 -- Hmox -- TWIST1 -- E
+rythropoietin    2E-06    2E-06    VEGF -- IL_8 -- Ang_2 -- TSP1_2 --
+ Maspin -- Invasiveness_migration -- Senescence -- Glut1_4 -- P21 -- 
+BCL_XL -- LDHA -- Permeability_leakiness -- Enolase_1 -- S6k1 -- Hmox
+ -- TWIST1    2E-06    2E-06    VEGF -- IL_8 -- Ang_2 -- TSP1_2 -- Ma
+spin -- Invasiveness_migration -- Senescence -- Glut1_4 -- P21 -- BCL
+_XL -- LDHA -- Permeability_leakiness -- Enolase_1 -- S6k1 -- Hmox --
+ TWIST1 -- Erythropoietin            
17.5    0    0    0.0019    1    VEGF -- IL_8 -- Ang_2 -- TSP1_2 -- In
+vasiveness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- LDH
+A -- Permeability_leakiness -- Enolase_1 -- S6k1 -- Hmox -- TWIST1 --
+ Erythropoietin    1E-06    1E-06    VEGF -- IL_8 -- Ang_2 -- TSP1_2 
+-- Maspin -- Invasiveness_migration -- Senescence -- Glut1_4 -- P21 -
+- BCL_XL -- LDHA -- Permeability_leakiness -- Enolase_1 -- S6k1 -- Hm
+ox -- TWIST1    1E-06    1E-06    VEGF -- IL_8 -- Ang_2 -- TSP1_2 -- 
+Maspin -- Invasiveness_migration -- Senescence -- Glut1_4 -- P21 -- B
+CL_XL -- LDHA -- Permeability_leakiness -- Enolase_1 -- S6k1 -- Hmox 
+-- TWIST1 -- Erythropoietin            
18    0    0    0.0011    1    VEGF -- IL_8 -- Ang_2 -- TSP1_2 -- Masp
+in -- Invasiveness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_X
+L -- LDHA -- Permeability_leakiness -- Enolase_1 -- S6k1 -- Hmox -- T
+WIST1 -- Erythropoietin    0.999932    1.1E-05    VEGF -- IL_8 -- Ang
+_2 -- TSP1_2 -- Maspin -- Invasiveness_migration -- Senescence -- Glu
+t1_4 -- P21 -- BCL_XL -- LDHA -- Enolase_1 -- Hmox -- TWIST1 -- Eryth
+ropoietin    4E-06    3E-06    VEGF -- IL_8 -- Ang_2 -- TSP1_2 -- Mas
+pin -- Invasiveness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_
+XL -- LDHA -- Permeability_leakiness -- Enolase_1 -- Hmox -- TWIST1 -
+- Erythropoietin            
18.5    0    0    0.0008    1    VEGF -- IL_8 -- Ang_2 -- Maspin -- In
+vasiveness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- LDH
+A -- Enolase_1 -- S6k1 -- Hmox -- TWIST1 -- Erythropoietin    2E-06  
+  2E-06    VEGF -- IL_8 -- Ang_2 -- TSP1_2 -- Maspin -- Invasiveness_
+migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- LDHA -- Enolas
+e_1 -- Hmox -- TWIST1 -- Erythropoietin    2E-06    2E-06    VEGF -- 
+IL_8 -- Ang_2 -- TSP1_2 -- Maspin -- Invasiveness_migration -- Senesc
+ence -- Glut1_4 -- P21 -- BCL_XL -- LDHA -- Permeability_leakiness --
+ Enolase_1 -- S6k1 -- Hmox -- TWIST1 -- Erythropoietin            
19    0    0    0.0006    1    VEGF -- IL_8 -- Ang_2 -- Maspin -- Inva
+siveness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- LDHA 
+-- Enolase_1 -- S6k1 -- Hmox -- TWIST1 -- Erythropoietin    2E-06    
+2E-06    VEGF -- IL_8 -- Ang_2 -- TSP1_2 -- Maspin -- Invasiveness_mi
+gration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- LDHA -- Permeabi
+lity_leakiness -- Enolase_1 -- S6k1 -- Hmox -- TWIST1 -- Erythropoiet
+in    0.999964    8E-06    VEGF -- IL_8 -- Ang_2 -- TSP1_2 -- Maspin 
+-- Invasiveness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -
+- LDHA -- Permeability_leakiness -- Enolase_1 -- Hmox -- TWIST1 -- Er
+ythropoietin            
19.5    0    0    0.0004    1    VEGF -- IL_8 -- Ang_2 -- Maspin -- In
+vasiveness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- LDH
+A -- Enolase_1 -- S6k1 -- Hmox -- TWIST1 -- Erythropoietin    2E-06  
+  2E-06    VEGF -- IL_8 -- Ang_2 -- TSP1_2 -- Maspin -- Invasiveness_
+migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- LDHA -- Permea
+bility_leakiness -- Enolase_1 -- S6k1 -- Hmox -- TWIST1 -- Erythropoi
+etin    0.999976    7E-06    VEGF -- IL_8 -- Ang_2 -- TSP1_2 -- Maspi
+n -- Invasiveness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL
+ -- LDHA -- Permeability_leakiness -- Enolase_1 -- Hmox -- TWIST1 -- 
+Erythropoietin            
20    0    0    0.0003    1    VEGF -- IL_8 -- Ang_2 -- Maspin -- Inva
+siveness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- LDHA 
+-- Enolase_1 -- S6k1 -- Hmox -- TWIST1 -- Erythropoietin    2E-06    
+2E-06    VEGF -- IL_8 -- Ang_2 -- TSP1_2 -- Maspin -- Invasiveness_mi
+gration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- LDHA -- Permeabi
+lity_leakiness -- Enolase_1 -- S6k1 -- Hmox -- TWIST1 -- Erythropoiet
+in    0.999986    5E-06    VEGF -- IL_8 -- Ang_2 -- TSP1_2 -- Maspin 
+-- Invasiveness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -
+- LDHA -- Permeability_leakiness -- Enolase_1 -- Hmox -- TWIST1 -- Er
+ythropoietin            
20.5    0    0    0.0001    1    VEGF -- IL_8 -- Ang_2 -- TSP1_2 -- Ma
+spin -- Invasiveness_migration -- Senescence -- Glut1_4 -- P21 -- BCL
+_XL -- LDHA -- Permeability_leakiness -- Enolase_1 -- Hmox -- TWIST1 
+-- Erythropoietin    6E-06    3E-06    VEGF -- IL_8 -- Ang_2 -- TSP1_
+2 -- Maspin -- Invasiveness_migration -- Senescence -- Glut1_4 -- P21
+ -- BCL_XL -- LDHA -- Permeability_leakiness -- Enolase_1 -- S6k1 -- 
+Hmox -- TWIST1 -- Erythropoietin    0.999994    3E-06                
21    0    0    0.0001    1    VEGF -- IL_8 -- Ang_2 -- TSP1_2 -- Masp
+in -- Invasiveness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_X
+L -- LDHA -- Permeability_leakiness -- Enolase_1 -- Hmox -- TWIST1 --
+ Erythropoietin    4E-06    3E-06    VEGF -- IL_8 -- Ang_2 -- TSP1_2 
+-- Maspin -- Invasiveness_migration -- Senescence -- Glut1_4 -- P21 -
+- BCL_XL -- LDHA -- Permeability_leakiness -- Enolase_1 -- S6k1 -- Hm
+ox -- TWIST1 -- Erythropoietin    0.999996    3E-06                
21.5    0    0    0    1    VEGF -- IL_8 -- Ang_2 -- TSP1_2 -- Maspin 
+-- Invasiveness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -
+- LDHA -- Permeability_leakiness -- Enolase_1 -- Hmox -- TWIST1 -- Er
+ythropoietin    2E-06    2E-06    VEGF -- IL_8 -- Ang_2 -- TSP1_2 -- 
+Maspin -- Invasiveness_migration -- Senescence -- Glut1_4 -- P21 -- B
+CL_XL -- LDHA -- Permeability_leakiness -- Enolase_1 -- S6k1 -- Hmox 
+-- TWIST1 -- Erythropoietin    0.999998    2E-06                
22    0    0    0    1    VEGF -- IL_8 -- Ang_2 -- TSP1_2 -- Maspin --
+ Invasiveness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- 
+LDHA -- Permeability_leakiness -- Enolase_1 -- S6k1 -- Hmox -- TWIST1
+ -- Erythropoietin    1    0                            
22.5    0    0    0    1    VEGF -- IL_8 -- Ang_2 -- TSP1_2 -- Maspin 
+-- Invasiveness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -
+- LDHA -- Permeability_leakiness -- Enolase_1 -- S6k1 -- Hmox -- TWIS
+T1 -- Erythropoietin    1    0                            
23    0    0    0    1    VEGF -- IL_8 -- Ang_2 -- TSP1_2 -- Maspin --
+ Invasiveness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- 
+LDHA -- Permeability_leakiness -- Enolase_1 -- S6k1 -- Hmox -- TWIST1
+ -- Erythropoietin    1    0                            
23.5    0    0    0    1    VEGF -- IL_8 -- Ang_2 -- TSP1_2 -- Maspin 
+-- Invasiveness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -
+- LDHA -- Permeability_leakiness -- Enolase_1 -- S6k1 -- Hmox -- TWIS
+T1 -- Erythropoietin    1    0                            
24    0    0    0    1    VEGF -- IL_8 -- Ang_2 -- TSP1_2 -- Maspin --
+ Invasiveness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- 
+LDHA -- Permeability_leakiness -- Enolase_1 -- S6k1 -- Hmox -- TWIST1
+ -- Erythropoietin    1    0                            
24.5    0    0    0    1    VEGF -- IL_8 -- Ang_2 -- TSP1_2 -- Maspin 
+-- Invasiveness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -
+- LDHA -- Permeability_leakiness -- Enolase_1 -- S6k1 -- Hmox -- TWIS
+T1 -- Erythropoietin    1    0                            
25    0    0    0    1    VEGF -- IL_8 -- Ang_2 -- TSP1_2 -- Maspin --
+ Invasiveness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- 
+LDHA -- Permeability_leakiness -- Enolase_1 -- S6k1 -- Hmox -- TWIST1
+ -- Erythropoietin    1    0                            
25.5    0    0    0    1    VEGF -- IL_8 -- Ang_2 -- TSP1_2 -- Maspin 
+-- Invasiveness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -
+- LDHA -- Permeability_leakiness -- Enolase_1 -- S6k1 -- Hmox -- TWIS
+T1 -- Erythropoietin    1    0                            
26    0    0    0    1    VEGF -- IL_8 -- Ang_2 -- TSP1_2 -- Maspin --
+ Invasiveness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- 
+LDHA -- Permeability_leakiness -- Enolase_1 -- S6k1 -- Hmox -- TWIST1
+ -- Erythropoietin    1    0                            
26.5    0    0    0    1    VEGF -- IL_8 -- Ang_2 -- TSP1_2 -- Maspin 
+-- Invasiveness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -
+- LDHA -- Permeability_leakiness -- Enolase_1 -- S6k1 -- Hmox -- TWIS
+T1 -- Erythropoietin    1    0                            
27    0    0    0    1    VEGF -- IL_8 -- Ang_2 -- TSP1_2 -- Maspin --
+ Invasiveness_migration -- Senescence -- Glut1_4 -- P21 -- BCL_XL -- 
+LDHA -- Permeability_leakiness -- Enolase_1 -- S6k1 -- Hmox -- TWIST1
+ -- Erythropoietin    1    0

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Something or the other, a monk since 2009

Replies are listed 'Best First'.
Re^5: MCE: How to access variables globally
by marioroy (Prior) on Dec 20, 2021 at 10:51 UTC

    Greetings, biohisham,

    Gathering nested data is possible with a gather callback. MCE::Relay is used to relay the index line counter. I commented out the section regarding past index line. Starting from 0 each time made me wonder. I changed it to relay index line.

    Please note that $ret_FullGlobal, $ret_ProbState, and $ret_ErrProbState hashes are HoH-H and HoH. Important! Remember to "not" gather HoH->A and HoA structures containing "only" high indexes. Perl is likely to reserve memory for the empty array slots. For your use case, HoH-H and HoH are your friends with regards to gathering nested structure. The gather callback can then append/populate the global HoH->A and HoA structures.

    Read more... (6 kB)
[reply]
[d/l]
Re^5: MCE: How to access variables globally
by kcott (Archbishop) on Dec 20, 2021 at 08:40 UTC
    "Thanks a lot Ken for your help; your guess is on-spot."

    OK, that's great.

    Now that I see you're working with CSV data, one further piece of advice: take a look at Text::CSV (and note that if you also have Text::CSV_XS installed, it will run faster).

    — Ken

[reply]

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