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Re: UNIX and Perl to the Rescue --like book for Python?

by Anonymous Monk
on Mar 17, 2015 at 03:35 UTC ( [id://1120257]=note: print w/replies, xml ) Need Help??


in reply to UNIX and Perl to the Rescue --like book for Python?

So this is the books website: UNIX and Perl to the Rescue!: A Field Guide for the Life Sciences (and Other Data-rich Pursuits): Dr Keith Bradnam, Ian Korf

And apparently : How good is their Unix & Perl material ( Unix & Perl Primer for Biologists ) ? Good enough to get you a job in bioinformatics!

So armed with that knowledge I try python for biologists, stumble upon Python for Biologists books (Python for Biologists and Advanced Python for Biologists) which is kinda similar enough .. so look at the reviews, the perl book by PhD, this book by a PhD ... seemingly positive reviews ... you probably won't go wrong looking more in depth at reviews of this book and comparing to the reviews for the perl book, comparing the table of contents

So I think thats it :) please check it out and report back (in this thread) your thoughts/experiences

  • Comment on Re: UNIX and Perl to the Rescue --like book for Python?

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Re^2: UNIX and Perl to the Rescue --like book for Python?
by ww (Archbishop) on Mar 17, 2015 at 12:22 UTC

    Piled higher (&) Deeper authorship is no guarantee of quality content.

    :-)  

    Quite seriously, tho, if you can tell me the PhD author is a bioinformatics practitioner with a some serious CS and Perl background, I'd take citing the authorship more seriously. But merely citing degrees is NOT a recommendation, per se. Try "Learning Perl" -- at least for a start.

      Piled higher (&) Deeper authorship is no guarantee of quality content. :-) Quite seriously, tho, if you can tell me the PhD author is a bioinformatics practitioner with a some serious CS and Perl background, I'd take citing the authorship more seriously. But merely citing degrees is NOT a recommendation, per se. Try "Learning Perl" -- at least for a start.

      ww, you can't learn python from "Learning Perl" and "Learning Perl" doesn't touch upon biology

      Have you even looked at the freely available primer that is the inspiration for this book? Its pretty good

        I quote from OP's less-than-clear problem statement: " So, since i also want to look at some Python introduction... (emphasis supplied).

        I think the cited sentence from the OP supports my reading -- that OP wants to learn some Perl, as well as his explicitly stated interest in Python and bioperl.

        Does your response mean you think that interpretation is off-base? Do you suggest that one should not answer the Perl part of the question without also answering the Python and biological-studies elements?

        > "Learning Perl" doesn't touch upon biology

        ... I guess that this explain the platypus affair.
        actually this is quite funny, i realised, because when i was very young (not that im that old now). But before i got into computers i actually had a huge interest in biology to. I mean the main point for me in this Unix and Perl book is indeed Unix amd Perl. But this relation to biology, hmm interesting, coincidence? :D
Re^2: UNIX and Perl to the Rescue --like book for Python?
by ndo (Initiate) on Mar 21, 2015 at 00:13 UTC
    Hi again people, :) Thank you for this response, its much better then accusing me of trolling. :D I actually already even also had a tought in this direction. But after looking around a bit it looks to me that "Python for Unix and Linux System Administration" might be closest to the answer. Because of my interest in OSs growing into interest in Scripting/interpreted/memory managed langs. Also nice to know about Lama. Cuz 1000 pages scare me somewhat. Since to conquer it i will have to take same dedicated approach like with a with Bible, and it will surely also take a year or so, if not even more. p.s. Actually, if i think about it. It might look indeed that im trolling. Because it seems i like to ask some controversial questions. :D Like about Python on a Perl forum right. Who even does such a thing.. :) hf guys, cu

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