Re: Could not open

[davidj]

Hey FarTech,

Since I have no idea what fasta34.exe does, it's difficult to know where the problem might be. That being said, I do notice one thing about your code that might be causing it problems: the file $querry has not been closed when you pass it to fasta34.exe as a parameter and the exe may not be able to work with files that are already open. Try closing it first and see what happens.

davidj

[FarTech]

Hi David

i have already tried closing the file before calling the fasta34.exe..

-o $compare -Q $querry $library are for avoiding command line which other wise feed manually, ....if i remove the -Q $querry $library the program runs fine and i have to give the file name manually but the program hangs up further ...indicating use of uninitialize value at concatination

at if(m/>>(.{4,6})(.*)/)

under while (compare)

thanks