EXECUTING... Trying 13104 probes with perl 5.010000 at 669148.pl line 18. 1203590260 at 669148.pl line 20. Compiling REx "TATGTTTCGT|CCGCTTTTTA|CGAAGATTTC|GAACGACGGC|TGTGTTTAAC|CCTCA"... Final program: 1: TRIEC-EXACT[ACGT] (65526) ... 65526: END (0) stclass AHOCORASICKC-EXACT[ACGT] minlen 10 Compiling REx "((?-xism:TATGTTTCGT|CCGCTTTTTA|CGAAGATTTC|GAACGACGGC|TGTGTTT"... Final program: 1: OPEN1 (3) 3: TRIEC-EXACT[ACGT] (65529) ... 65529: CLOSE1 (65531) 65531: END (0) stclass AHOCORASICKC-EXACT[ACGT] minlen 10 Matching REx "((?-xism:TATGTTTCGT|CCGCTTTTTA|CGAAGATTTC|GAACGACGGC|TGTGTTT"... against "ACTCGAATTCCGAATAGATAGAAGTCTGCTGATAATATCGCGCCGGT TCTGATGCGCCTC"... Matching stclass AHOCORASICKC-EXACT[ACGT] against "ACTCGAATTCCGAATAGATAGAAGTCTGCTGATAATATCGCGCCGGTTCTGATGCGCCTC"... (1000000 chars) 0 <> | Charid: 2 CP: 41 State: 1, word=0 - legal 1 | Charid: 4 CP: 43 State: 52, word=0 - legal 2 | Charid: 1 CP: 54 State: ce, word=0 - legal 3 | Charid: 4 CP: 43 State: 1a2, word=0 - legal 4 | Charid: 3 CP: 47 State: 1a3, word=0 - legal